Protein
Contents
Protein¶
- Graphein - Residue Graph Tutorial
- Graphein - Atom Graph Tutorial
- Constructing Graphs from AlphaFold Protein Structure Database
- Constructing Subgraphs in Graphein
- Subsetting with a list of nodes
- Subgraphing based on Residue Types
- Subgraphing based on Chains
- Subgraphing to Protein Surface
- Subgraphing based on Secondary Structure
- Subgraphing based on sequence positions
- Subgraphs based on bond types
- K-hop subgraphs
- Subgraphing based on Atom Types
- High-level function
- Creating Protein Meshes in Graphein & 3D Visualisation
- Distance Matrix
- Plot 3D Structure
- Asteroid Plot