graphein.protein
================

.. currentmodule:: graphein.protein

Config
---------

.. currentmodule:: graphein.protein.config


.. autosummary::
    :nosignatures:

.. automodule:: graphein.protein.config
    :members:

Graphs
------
.. automodule:: graphein.protein.graphs
    :members:

Edges
------
Distance
^^^^^^^^^
.. automodule:: graphein.protein.edges.distance
    :members:

Intramolecular
^^^^^^^^^^^^^^^
.. automodule:: graphein.protein.edges.intramolecular
    :members:

Atomic
^^^^^^
.. automodule:: graphein.protein.edges.atomic
    :members:


Features
---------
Node
^^^^^
.. automodule:: graphein.protein.features.nodes.aaindex
    :members:
.. automodule:: graphein.protein.features.nodes.amino_acid
    :members:
.. automodule:: graphein.protein.features.nodes.dssp
    :members:
.. automodule:: graphein.protein.features.nodes.geometry
    :members:

Graph
^^^^^
.. automodule:: graphein.protein.features.graph.structure
    :members:

Sequence
^^^^^^^^^
.. automodule:: graphein.protein.features.sequence.embeddings
    :members:
.. automodule:: graphein.protein.features.sequence.propy
    :members:
.. automodule:: graphein.protein.features.sequence.sequence
    :members:

Sequence Utils
^^^^^^^^^^^^^^
.. automodule:: graphein.protein.features.sequence.embeddings
    :members:

Utils
^^^^^^
.. automodule:: graphein.protein.features.utils
    :members:



Subgraphs
---------
.. automodule:: graphein.protein.subgraphs
    :members:

Analysis
---------
.. automodule:: graphein.protein.analysis
    :members:

Meshes
------
.. automodule:: graphein.protein.meshes
    :members:

Visualisation
-------------
.. automodule:: graphein.protein.visualisation
    :members:

Utils
-----
.. automodule:: graphein.protein.utils
    :members:

Constants
----------
.. automodule:: graphein.protein.resi_atoms
    :members: